SNP Profiles of TSH 565 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AC	TT	AC	TT	TT	AT	AC	CT	AG	GT	AA	TT	AA
1._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
2._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
3._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
4._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
5._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
6._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
7._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
8._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
9._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
10._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
11._GC-01-005-1-05	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
12._TSH_565	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
13._TSH_565	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
14._TSH_565	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AC	CC	AA	CC	AA	AA	CG	AA	CC	CT	CT	AG	CG
1._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
2._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
3._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
4._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
5._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
6._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
7._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
8._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
9._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
10._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
11._GC-01-005-1-05	AG	_	_	_	_	AC	_	CG	_	CC	CT	_	_	_
12._TSH_565	AG	_	_	_	_	AC	_	CG	_	CC	AG	_	_	_
13._TSH_565	AG	_	_	_	_	AC	_	CG	_	CC	AG	_	_	_
14._TSH_565	AG	_	_	_	_	AC	_	CG	_	CC	AG	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	CG	CC	GT	AG	CT	TT	CC	AT	CT	CC	AG	GG	AA
1._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
2._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
3._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
4._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
5._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
6._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
7._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
8._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
9._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
10._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
11._GC-01-005-1-05	AG	_	CT	GT	AG	_	_	CC	_	CG	CC	AG	_	AA
12._TSH_565	_	_	_	AC	AG	_	_	CC	_	CG	GG	AG	_	AA
13._TSH_565	_	_	_	AC	AG	_	_	CC	_	CG	GG	AG	_	AA
14._TSH_565	_	_	_	AC	AG	_	_	CC	_	CG	GG	AG	_	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CT	CT	AT	CT	AG	CT	CT	GT	AA	CT	GT	GT	TT	AG
1._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
2._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
3._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
4._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
5._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
6._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
7._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
8._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
9._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
10._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
11._GC-01-005-1-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
12._TSH_565	_	_	_	_	AG	_	_	_	_	_	AC	_	_	_
13._TSH_565	_	_	_	_	AG	_	_	_	_	_	AC	_	_	_
14._TSH_565	_	_	_	_	AG	_	_	_	_	_	AC	_	_	_

	57	58	59	60
_Input profile	AG	CG	CT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._GC-01-005-1-05	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._TSH_565	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._TSH_565	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._TSH_565	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: TSH_565 RUQ_1741

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

2._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15 > FP4

Mars, 2018

3._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

Mars, 2018

4._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

Mars, 2018

5._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

Mars, 2018

6._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

Mars, 2018

7._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

8._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6 > FP3

Mars, 2018

9._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

10._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

11._TSH_565 GC-01-005-1-05

88.1 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

12._TSH_565

67.6 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: FP 4

Mars, 2018

13._TSH_565

67.6 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: FP 2

Mars, 2018

14._TSH_565

67.6 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: FP 1

Mars, 2018

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1237	53	TcSNP1253	54	TcSNP1275	55	TcSNP1293
56	TcSNP1401	57	TcSNP1404	58	TcSNP1458	59	TcSNP1524	60	TcSNP1527

SNP Profiles of TSH 565 View Data

Show/Hide Profiles

Input profile: TSH_565 RUQ_1741

1._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

2._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

3._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

4._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

5._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

6._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

7._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

8._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

9._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

10._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

11._TSH_565 GC-01-005-1-05

88.1 % 21 shared markers

12._TSH_565

67.6 % 17 shared markers

13._TSH_565

67.6 % 17 shared markers

14._TSH_565

67.6 % 17 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

88.1 %
21 shared markers

67.6 %
17 shared markers

67.6 %
17 shared markers

67.6 %
17 shared markers